Blueberry muffins are a classic treat that can brighten any morning. They remind us of cozy breakfasts, warm kitchens, and the sweet smell of baked goods wafting through the air. It’s no wonder I felt inspired to put together this list of 10 healthy blueberry muffin recipes that make meal prep a breeze. Whether you’re busy with work, school, or family life, these recipes will help you enjoy delicious, nutritious muffins without spending hours in the kitchen.
If you’re someone who values healthy living and wants quick, easy breakfast ideas, you’re in the right place. Maybe you’re gluten-free, vegan, or just looking for ways to sneak in more nutrition into your snacks. These recipes cater to various dietary needs while keeping the taste factors high. I know you care about what you eat, and I want to show you that healthy can also mean tasty.
What can you expect from this collection? Each recipe is designed to be simple and satisfying, making them perfect for your blueberry muffin meal prep. You’ll find options like Protein-Packed Blueberry Muffins and Low-Sugar Blueberry Muffins that fit right into your busy lifestyle. Plus, they make great nutritious snacks that you can enjoy any time of day. So grab your mixing bowl and get ready to bake homemade blueberry muffins that not only taste great but also fuel your body!
Key Takeaways
– This post features 10 healthy blueberry muffin recipes that cater to various dietary needs, including gluten-free and vegan options.
– Each recipe is quick and easy, perfect for meal prep or busy mornings.
– You’ll discover unique variations like Banana Blueberry Muffins and Coconut Flour Blueberry Muffins to keep your breakfasts exciting.
– The recipes ensure you get nutritious snacks without compromising on flavor or enjoyment.
– By preparing these muffins ahead of time, you’ll save time during the week while still enjoying wholesome homemade treats.
Contents
- 1. Gluten-Free Classic Blueberry Muffins
- 2. Protein-Packed Blueberry Muffins
- 3. Vegan Blueberry Muffins
- 4. Banana Blueberry Muffins
- 5. Almond Flour Blueberry Muffins
- 6. Chia Seed Blueberry Muffins
- 7. Coconut Flour Blueberry Muffins
- 8. Low-Sugar Blueberry Muffins
- 9. Spelt Flour Blueberry Muffins
- 10. Lemon Blueberry Muffins
1. Gluten-Free Classic Blueberry Muffins

Are you craving a delightful treat that won’t derail your healthy eating? These gluten-free classic blueberry muffins are just what you need! Bursting with juicy blueberries and made with light gluten-free flour, they’re not only easy to prepare but also perfect for meal prep, allowing you to enjoy them throughout the week. Plus, they deliver a nutritious punch with fiber and antioxidants from the blueberries, making them a guilt-free indulgence.
Ingredients:
– 2 cups gluten-free flour blend
– 1 cup almond milk
– 1/3 cup maple syrup
– 1/4 cup coconut oil, melted
– 2 teaspoons baking powder
– 1 teaspoon vanilla extract
– 1 cup fresh blueberries
– A pinch of salt
Instructions:
1. Preheat your oven to 350°F (175°C) and line a muffin tin with paper liners.
2. In a large bowl, combine gluten-free flour, baking powder, and salt.
3. In another bowl, whisk together almond milk, melted coconut oil, maple syrup, and vanilla extract.
4. Mix the wet ingredients with the dry ingredients until just combined, then gently fold in the blueberries.
5. Divide the batter among muffin cups and bake for about 20 minutes, or until a toothpick comes out clean.
6. Allow to cool slightly on a wire rack.
These muffins are perfect for breakfast or a snack!
FAQs:
– Can I substitute the almond milk? Yes, any non-dairy milk works well!
– How do I store leftovers? Keep them in an airtight container at room temperature or in the fridge for longer freshness.
Blueberries pack about 3.6 g of fiber per cup and a burst of antioxidants—perfect for healthy blueberry muffin recipes. These gluten-free classics make meal prep effortless, so you can enjoy a tasty, guilt-free treat all week.
Gluten-Free Classic Blueberry Muffins
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Price updated on December 17, 2025 at 4:06 PM
Bob’s Red Mill Gluten Free 1 to 1 Baking Flour, 22oz (Pack of 4) – Non G…
Amazon$21.91
Cup4Cup Wholesome Flour, 2 Pounds, Certified Gluten Free, 1:1 Whole Whea…
Amazon$20.34
King Arthur Flour Measure for Measure Flour, Gluten Free, 3 Lb, (Pack Of 4)
Amazon$34.48
Better Batter Original Blend Multipurpose Certified Gluten-Free Flour, T…
Amazon$39.95
gfJules Certified Gluten Free All Purpose Flour | No Grit | Great Cup fo…
Amazon$42.992. Protein-Packed Blueberry Muffins

Looking to kickstart your day with a boost? These protein-packed blueberry muffins are the perfect solution! Infused with protein powder, they provide that extra fuel you need to power through your morning. Not only do they taste amazing, but they also make for a satisfying breakfast or post-workout snack that keeps you full longer.
Ingredients:
– 1 cup oat flour
– 1 scoop vanilla protein powder
– 1/2 cup almond milk
– 1/3 cup applesauce
– 1/4 cup honey or agave syrup
– 2 teaspoons baking powder
– 1 cup blueberries
– A pinch of salt
Instructions:
1. Preheat your oven to 350°F (175°C) and line a muffin tin with liners.
2. In a mixing bowl, combine oat flour, protein powder, baking powder, and salt.
3. In another bowl, whisk almond milk, applesauce, and sweetener.
4. Pour the wet ingredients into the dry ingredients and mix until just combined. Gently fold in blueberries.
5. Fill muffin cups and bake for 18 minutes or until golden brown.
6. Let cool before enjoying.
These muffins freeze well, so feel free to make a large batch!
FAQs:
– Can I use whey protein? Yes, but the texture may differ slightly.
– How long can I keep these muffins? They last about 5 days in an airtight container.
Protein-Packed Blueberry Muffins
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Price updated on December 17, 2025 at 4:06 PM
Optimum Nutrition Gold Standard 100% Whey Naturally Flavored Protein Pow…
Amazon$88.09
Dymatize ISO100 Whey Protein Powder Isolate, Gourmet Vanilla, 25g of Pro…
Amazon$33.43
Muscletech Whey Protein Powder (Vanilla Cream, 2.2 Pound) – Nitro-Tech U…
Amazon$35.93
Premier Protein Powder, Vanilla Milkshake, 30g Protein, 1g Sugar, 100% W…
Amazon$25.49
Arms Race Nutrition | ARN | Isolate Whey Protein (32 Servings, French Va…
Amazon$54.993. Vegan Blueberry Muffins

Are you on a plant-based journey and in need of a sweet treat? These vegan blueberry muffins are a delightful option! They are incredibly moist and fluffy, made with simple ingredients that create a flavorful experience without any animal products. You’ll love how easy they are to make and how satisfying they are to eat.
Ingredients:
– 1 1/2 cups whole wheat flour
– 1/2 cup almond milk
– 1/3 cup maple syrup
– 1/4 cup vegetable oil
– 1 tablespoon ground flaxseed mixed with 3 tablespoons water
– 1 teaspoon baking soda
– 1 teaspoon cinnamon
– 1 cup blueberries
Instructions:
1. Preheat your oven to 350°F (175°C) and line a muffin tin with parchment liners.
2. In a mixing bowl, combine whole wheat flour, baking soda, flaxseed mixture, and cinnamon.
3. In another bowl, mix almond milk, vegetable oil, and maple syrup.
4. Combine wet and dry ingredients, gently folding in blueberries.
5. Fill muffin cups and bake for 20 minutes or until golden.
6. Allow cooling before enjoying to let the flavors meld.
These muffins are great for any time of day and can easily be stored in the fridge for a week!
FAQs:
– Can I substitute the flaxseed? Yes, you can use chia seeds instead!
– What if I have leftover batter? You can store it in the fridge for up to 24 hours.
Vegan Blueberry Muffins
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Price updated on December 17, 2025 at 4:06 PM
Bob’s Red Mill Organic Golden Flaxseed Meal, 32oz (Pack of 4) – Non GMO,…
Amazon$40.76
Bob’s Red Mill Flaxseed Meal, 32oz (Pack of 4) – Non GMO, Vegan, Paleo F…
Amazon$34.95
Boxiki Kitchen Non-Stick 12 Cup Silicone Muffin Pan With Steel Frame – B…
Amazon$39.75
USA Pan Bakeware Muffin Pan, 12-Well, Aluminized Steel
Amazon$31.99
4. Banana Blueberry Muffins

Craving something sweet and satisfying? These banana blueberry muffins are a wonderful twist on a classic favorite! Combining the rich flavors of ripe bananas with juicy blueberries, they’re naturally sweetened and incredibly moist, making them a fantastic breakfast option for both kids and adults.
Ingredients:
– 1 1/2 cups oat flour
– 2 ripe bananas, mashed
– 1/2 cup almond milk
– 1/3 cup honey or maple syrup
– 2 teaspoons baking powder
– 1 cup blueberries
Instructions:
1. Preheat your oven to 350°F (175°C) and line a muffin tin with paper liners.
2. In one bowl, mix oat flour and baking powder together.
3. In another bowl, mash bananas and whisk in almond milk and sweetener.
4. Combine wet and dry ingredients until just mixed and fold in blueberries.
5. Divide the batter among muffin cups and bake for around 20 minutes.
6. Allow cooling for a few minutes on a wire rack.
These muffins are perfect for meal prep, and the kids will love them too!
FAQs:
– Can I use frozen bananas? Yes! Just thaw and mash them.
– How do I store these muffins? Keep them in an airtight container for freshness.
Banana Blueberry Muffins
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Price updated on December 17, 2025 at 4:06 PM
Anthony’s Organic Whole Grain Oat Flour, 4 lb, Gluten Free, Non GMO, Non…
Amazon$21.49
Bob’s Red Mill Oat Flour, Gluten Free, 18 Ounces (Pack Of 4)
Amazon$25.84
Food to Live Organic Oat Flour, 8 Pounds – Non-GMO, Fine, Stone Ground f…
Amazon$41.20
GF Harvest Gluten Free Organic Whole Grain Oat Flour, 32 Ounce Bag, Pack…
Amazon$31.715. Almond Flour Blueberry Muffins

If you enjoy the nutty flavor of almond flour, these muffins are a must-try! They are gluten-free and full of healthy fats, ensuring you stay satisfied. The moist texture and rich flavor make them an ideal treat for any time of day, and they come together quickly for easy meal prep.
Ingredients:
– 2 cups almond flour
– 3 eggs
– 1/4 cup maple syrup
– 1/4 cup coconut oil, melted
– 1 teaspoon baking soda
– 1 cup blueberries
Instructions:
1. Preheat your oven to 350°F (175°C) and grease a muffin tin.
2. In a bowl, mix almond flour and baking soda together.
3. In another bowl, whisk eggs, maple syrup, and melted coconut oil.
4. Combine wet and dry ingredients, gently folding in blueberries.
5. Fill muffin cups and bake for about 20 minutes or until a toothpick comes out clean.
6. Cool on a wire rack.
These muffins are perfect for meal prepping! Store in an airtight container for easy access during busy mornings.
FAQs:
– Can I substitute almond flour with another flour? Yes, but the texture may change.
– How can I add some extra flavor? Try adding a dash of almond extract!
Fun fact: Almond flour muffins have about 25% fewer carbs than wheat muffins, yet stay just as fluffy. In our healthy blueberry muffin recipes, a 2-cup almond flour batter gives a moist, satisfying treat in minutes.
Almond Flour Blueberry Muffins
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Price updated on December 17, 2025 at 4:08 PM
Anthony’s Blanched Almond Flour, Culinary Grade, 5 lb, Extra-Finely Grou…
Amazon$38.99
Bob’s Red Mill Natural Almond Flour, 16oz (Pack of 4) – Non GMO, Vegan, …
Amazon$35.12
King Arthur Flour Gluten-Free Almond Flour, 16 Ounce (Pack of 4)
Amazon$60.75
Terrasoul Superfoods Organic Almond Flour, 2 Lbs (Pack of 2) – Fine Text…
Amazon$29.99
Oh! Nuts Blanched Almond Flour | All-Natural Wheat Substitute for Baking…
Amazon$34.006. Chia Seed Blueberry Muffins

Want to add a nutritional boost to your snack? These chia seed blueberry muffins are the perfect solution! Packed with omega-3 fatty acids, fiber, and protein, they not only taste delicious but also nourish your body. The delightful crunch of chia seeds adds a unique texture that you’ll love.
Ingredients:
– 1 cup whole wheat flour
– 1/4 cup chia seeds
– 1/2 cup almond milk
– 1/3 cup honey
– 1 teaspoon baking powder
– 1 cup blueberries
Instructions:
1. Preheat your oven to 350°F (175°C) and line a muffin tray with liners.
2. In a mixing bowl, combine flour, chia seeds, and baking powder.
3. In a separate bowl, whisk together almond milk and honey.
4. Combine wet and dry mixtures and fold in blueberries.
5. Spoon the batter into muffin liners and bake for about 18 minutes.
6. Allow muffins to cool before enjoying.
These muffins can be stored for up to a week, making them great for meal prep!
FAQs:
– Can I use other seeds? Yes, feel free to experiment with flaxseeds or pumpkin seeds!
– How do I know when they are done? A toothpick should come out clean when inserted into the center.
Chia Seed Blueberry Muffins
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Price updated on December 17, 2025 at 4:08 PM
Greenfit Premium Bulk Chia Seeds (25Lbs Bag) | A+ Grade Chia | Nutrient-…
Amazon$94.99
Greenfit Premium Bulk Chia Seeds (10Lbs Bag) | A+ Grade Chia | Nutrient-…
Amazon$45.99
Healthworks Superfoods Raw Chia Seeds – 96 Oz / 6 Lbs – Premium & All-Na…
Amazon$27.99
Bobs Red Mill Organic Chia Seeds, 12 Ounce (Pack of 5)
Amazon$42.15
Better Body Foods, Organic Chia Seeds with Calcium, Iron, Potassium, 535…
Amazon$36.907. Coconut Flour Blueberry Muffins

Craving a tropical twist? These coconut flour blueberry muffins are sure to delight! Naturally gluten-free, they offer a unique flavor that pairs beautifully with the sweetness of blueberries. Plus, they’re easy to whip up, making them a fantastic option for your next snack or breakfast treat.
Ingredients:
– 1 1/2 cups coconut flour
– 6 eggs
– 1/2 cup honey
– 1/4 cup melted coconut oil
– 1 teaspoon baking powder
– 1 cup blueberries
Instructions:
1. Preheat your oven to 350°F (175°C) and prepare a muffin tin.
2. In a large mixing bowl, whisk together coconut flour and baking powder.
3. In another bowl, combine eggs, honey, and melted coconut oil.
4. Mix the wet ingredients into the dry, then fold in blueberries.
5. Fill the muffin cups and bake for about 25 minutes.
6. Let cool before serving.
These muffins have a delightful coconut flavor that’s refreshing! Store in the fridge for a tasty snack throughout the week.
FAQs:
– Can I substitute coconut flour with another flour? Coconut flour absorbs more moisture, so it may require adjustments.
– How do I know if they are cooked? The tops will be golden and a toothpick should come out clean.
Coconut Flour Blueberry Muffins
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Price updated on December 17, 2025 at 4:07 PM
Bob’s Red Mill Organic Coconut Flour, 16oz (Pack of 4) – Non GMO, Fair T…
Amazon$25.56
Terrasoul Superfoods Organic Coconut Flour, 6 Lbs (3 Pack) – Gluten-Free…
Amazon$24.99
Let’s Do Organic Coconut Flour – For Baking, Wheat Flour Alternative, Hi…
Amazon$29.84
CROP BY POP – Organic Coconut Flour (64 Oz – 4 LB) Packed Fresh in Resea…
Amazon$20.97
8. Low-Sugar Blueberry Muffins

Want to enjoy a sweet treat without the extra sugar? These low-sugar blueberry muffins are the answer! They provide all the delightful flavors of blueberries while keeping sugar content low, making them a smart choice for any time of day.
Ingredients:
– 1 1/2 cups whole wheat flour
– 1/2 cup unsweetened apple sauce
– 1/2 cup almond milk
– 1/2 cup blueberries
– 2 teaspoons baking powder
– 1 teaspoon vanilla extract
Instructions:
1. Preheat your oven to 350°F (175°C) and line a muffin tin with paper liners.
2. In a bowl, mix whole wheat flour and baking powder together.
3. In a separate bowl, whisk apple sauce, almond milk, and vanilla extract.
4. Combine the wet and dry mixtures and gently fold in blueberries.
5. Divide the batter among muffin liners and bake for about 20 minutes.
6. Cool on a wire rack before serving.
These muffins are a guilt-free treat, perfect for breakfast or a snack! They keep well in the fridge, so make a batch for the week!
FAQs:
– Can I use flavored apple sauce? Yes, but be mindful of the added sugars.
– How do I store them? Keep in an airtight container to maintain freshness.
Low-Sugar Blueberry Muffins
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Price updated on December 17, 2025 at 4:08 PM
Boxiki Kitchen Non-Stick 12 Cup Silicone Muffin Pan With Steel Frame – B…
Amazon$39.75
Trudeau Structure Silicone Muffin Pan – 12 Cup, Flexible Silicone with H…
Amazon$31.49
GreenLife 12-Cup Muffin Pan, PFAS-Free Healthy Nonstick Baking Tray, 11….
Amazon$29.99
Starfrit Silicone 12 Cup Muffin Pan with Integrated Metal Frame – Green
Amazon$24.999. Spelt Flour Blueberry Muffins

Curious about trying a different kind of flour? These spelt flour blueberry muffins offer a nutty flavor and a nutritious twist! Spelt flour is rich in fiber and protein, making these muffins not only delicious but also a great option for health-conscious bakers.
Ingredients:
– 1 1/2 cups spelt flour
– 1/2 cup almond milk
– 1/3 cup honey
– 1/4 cup coconut oil, melted
– 1 teaspoon baking soda
– 1 cup blueberries
Instructions:
1. Preheat your oven to 350°F (175°C) and prepare a muffin tin.
2. In a bowl, mix spelt flour and baking soda.
3. In another bowl, combine almond milk, honey, and melted coconut oil.
4. Mix wet ingredients into dry, then fold in blueberries.
5. Fill muffin cups and bake for about 20 minutes.
6. Cool before serving.
These muffins are amazing warm with a pat of butter or as a quick snack throughout the day!
FAQs:
– Is spelt flour gluten-free? No, it contains gluten but is often easier to digest.
– Can I mix in nuts? Absolutely! Chopped walnuts or almonds would make a great addition.
Fun fact: Spelt flour muffins pack 2x the fiber of standard white-flour muffins. That nutty base plus blueberries makes these healthy blueberry muffin recipes both satisfying and easy to prep. Bake a batch and power your week with wholesome goodness.
Spelt Flour Blueberry Muffins
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Price updated on December 17, 2025 at 4:08 PM
Bob’s Red Mill Organic Spelt Flour, 20oz (Pack of 4) – Non GMO, Whole Gr…
Amazon$20.76
One Degree Organic Foods Sprouted Spelt Flour, 80 Ounce
Amazon$25.50
Purity Foods VitaSpelt Non-GMO White Unbleached Spelt Flour 25 lb bag
Amazon$64.99
Great River Organic Milling Organic Spelt Flour | Whole Grain Ancient Wh…
Amazon$29.9910. Lemon Blueberry Muffins

Looking to brighten your day? These lemon blueberry muffins add a zesty twist that you’ll love! The fresh lemon flavor pairs perfectly with the sweetness of blueberries, creating a delightful treat that’s both refreshing and satisfying.
Ingredients:
– 1 1/2 cups all-purpose gluten-free flour
– 1/2 cup almond milk
– 1/4 cup lemon juice
– 1 tablespoon lemon zest
– 1/3 cup honey or agave syrup
– 2 teaspoons baking powder
– 1 cup blueberries
Instructions:
1. Preheat your oven to 350°F (175°C) and line muffin tins with paper liners.
2. In a bowl, whisk together gluten-free flour and baking powder.
3. In another bowl, mix almond milk, lemon juice, honey, and lemon zest.
4. Combine wet and dry mixtures and gently fold in blueberries.
5. Fill muffin cups and bake for about 20 minutes.
6. Let cool before enjoying this refreshing treat.
These muffins are great for breakfast or as a light snack! Store in an airtight container for freshness throughout the week!
FAQs:
– Can I use bottled lemon juice? Fresh juice is recommended for the best flavor!
– How should I serve them? They’re delicious on their own or with a dollop of Greek yogurt.
Lemon Blueberry Muffins
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Price updated on December 17, 2025 at 4:10 PM
Bob’s Red Mill Gluten Free 1 to 1 Baking Flour, 22oz (Pack of 4) – Non G…
Amazon$21.91
King Arthur Flour Measure for Measure Flour, Gluten Free, 3 Lb, (Pack Of 4)
Amazon$34.48
Better Batter Original Blend Multipurpose Gluten Free Flour 2.5lb – Cert…
Amazon$34.00
Great River Milling Gluten Free All Purpose Flour | Made from All Purpos…
Amazon$24.99
Conclusion

These 10 healthy blueberry muffin recipes are not only perfect for easy meal prep but also cater to a variety of dietary needs, making them a fantastic addition to any nutrition plan. From gluten-free to low-sugar options, each recipe offers delicious flavors and wholesome ingredients that can power your day. So, pick a few favorites, bake a batch, and enjoy the wholesome goodness of homemade blueberry muffins all week long!
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Frequently Asked Questions
What makes these healthy blueberry muffin recipes gluten-free and a smart choice for meal prep?
These healthy blueberry muffin recipes are built with gluten-free options like almond flour or gluten-free flour blends instead of wheat, plus nourishing ingredients to keep you energized. They prove you can enjoy a delicious treat without gluten or excess sugar.
Practical tips: choose a gluten-free flour blend or almond flour you like, add a bit of Greek yogurt or dairy-free yogurt for moisture, and use fresh or frozen blueberries for flavorful bursts. Always check labels to confirm gluten-free ingredients, and aim for a balance of fiber, protein, and natural sweeteners.
Storage: bake in advance and store in an airtight container; at room temperature up to 2-3 days, refrigerate up to a week, or freeze individual portions for easy easy breakfast ideas all week.
How can I use these healthy blueberry muffin recipes for meal prep and easy breakfasts?
Batch bake a bigger batch, then portion into containers for quick mornings. These muffins pair beautifully with yogurt, nuts, or a smoothie for a complete easy breakfast ideas routine.
Pro tips: label portions with bake dates, refrigerate for up to 7 days, or freeze extras for 2-3 months. Reheat in a microwave for 20-30 seconds or a quick 5-7 minute warm-up in the oven. This approach keeps blueberry muffin meal prep simple and tasty all week.
Are these homemade blueberry muffins dairy-free, or can I adapt them for dairy-free diets?
Yes—these can be dairy-friendly or easily adapted to dairy-free diets. Swap in dairy-free yogurt or applesauce for dairy yogurt, and use plant-based milk (like almond or oat milk). If a recipe uses butter, substitute with coconut oil or a dairy-free butter. With these swaps, you still get moist, flavorful muffins that fit dairy-free needs while staying true to the healthy blueberry muffin recipes concept.
What ingredients keep these muffins healthy, and how can I substitute to maintain gluten-free options?
The healthy angle comes from fiber-rich bases (like oats or nut flours), protein from eggs or yogurt, and natural sweeteners such as mashed banana or maple syrup. To stay gluten-free, use certified gluten-free oats and/or a gluten-free flour blend like almond or rice flour blends. Substitutions to keep them nourishing: flax or chia eggs for binding, unsweetened applesauce instead of oil, and extra blueberries for flavor while reducing refined sugar. These ideas keep the muffins nutritious and satisfying as part of healthy blueberry muffin recipes.
How should I store these muffins and how long do they stay fresh?
For best freshness, store in an airtight container. At room temperature, they’ll stay good for 2-3 days; in the fridge, up to a week. For longer storage, freeze individual muffins for 2-3 months and reheat as needed. Thaw at room temperature or warm in a 350°F oven for about 5-7 minutes. Perfect for homemade blueberry muffins that are ready when you are, and great as part of nutritious snacks or quick easy breakfast ideas.
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